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Overview
Notebooks
Day 1
QC and Normalisation
Dimensionality reduction, clustering and annotation
Batch Correction
Downstream Analysis
Introduction
Day 2
Ligand-Receptor Interactions
Introduction
Spatial Analysis
1. SpatialData Objects
2. Static Plotting
3. Interactive Plotting with Napari
4. Simple Analysis using scverse Tools
5. Transformations (advanced)
6. Niche Calculation Tutorial (advanced)
Day 3
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