Examples#
Examples from real datasets you’d actually analyse.
Visium mouse brain
Render H&E tissue, overlay spots, color by gene expression and by cluster, and finish with a publication-style figure.
Interactive region annotation
Draw regions of interest directly on a spatialdata-plot canvas with
sdata.pl.annotate(...) and persist them as a ShapesModel element.
Datashader reductions
How overlapping primitives aggregate a continuous colour on the datashader
backend: datashader_reduction (max/mean/sum/count/std),
method="datashader" for images, and the contrast caveat.