Examples#
Examples from real datasets you’d actually analyse.
Visium mouse brain
Render H&E tissue, overlay spots, color by gene expression and by cluster, and finish with a publication-style figure.
Interactive region annotation
Draw regions of interest directly on a spatialdata-plot canvas with
sdata.pl.annotate(...) and persist them as a ShapesModel element.
Legends and colorbars
Place and style categorical legends and continuous colorbars: legend_loc,
legend_title, na_in_legend, legend_params, and colorbar_params, on a
real Visium mouse-brain section.