0.12.2.dev185+ge9f3a68
Data structure and usage principles
Tutorials
Loading adaptive immune receptor repertoire (
AIRR
)-sequencing data with Scirpy
Loading data from estabilshed analysis pipelines or AIRR-compliant tools
Creating AnnData objects from other formats
scirpy.io.AirrCell
scirpy.io.from_airr_cells
Combining multiple samples
Analysis of 3k T cells from cancer
API
Immune receptor (IR) model
Glossary
Developer Documentation
Other versions
Bibliography
scirpy
Tutorials
Loading adaptive immune receptor repertoire (
AIRR
)-sequencing data with Scirpy
scirpy.io.AirrCell
scirpy.io.AirrCell.VDJ_LOCI
Edit on GitHub
scirpy.io.AirrCell.VDJ_LOCI
AirrCell.
VDJ_LOCI
=
('TRB',
'TRD',
'IGH')
Identifiers of loci with a
V-D-J
junction