Examples#
Examples from real datasets you’d actually analyse.
Visium mouse brain
Render H&E tissue, overlay spots, color by gene expression and by cluster, and finish with a publication-style figure.
Interactive region annotation
Draw regions of interest directly on a spatialdata-plot canvas with
sdata.pl.annotate(...) and persist them as a ShapesModel element.
Colouring points
Colour a point element by continuous (cmap, norm, colorbar) or
categorical (palette, groups, na_color, legend) columns, and tune
size/alpha, on real Xenium transcripts.