If you are new to the scverse, get started with this set of tutorials covering basic analysis and functionality of the core pacakges. For more tutorials as well as API documentation and user guides, see the sites of individual packages.

You can also find recordings of past talks and workshops on our YouTube channel.


Data structures

These tutorials teach you how to work with scverse data structures. If you are new to Python and/or scverse, we recommend you read the "getting started" and "axes" tutorials first.


The following tutorials show show to analyze single-cell gene expression data.


Analyze spatial data generated with different technologies

Adaptive immune cell receptor

Tutorials for analyzing single-cell B-cell and T-cell receptor sequencing data

Surface proteins

CITE-seq analyses


Analyse chromatin accessibility data

Tips & Tricks

Useful tips for data analysis with scverse tools that are independent of specific packages.